Center for Fisheries Enhancement

Common snook (Centropomus undecimalis)

Overview
Research Interests Research Projects
Outreach  Publications

Aaron Adams, Ph.D.
Senior Scientist, Program Manager
The Fisheries Habitat Ecology program focuses on how fishes interact with their habitats and how disturbances influence these interactions. By understanding how fish use habitats, we can develop a better understanding of how disturbances impact these fish-habitat interactions and ultimately how disturbances affect fish populations.

Natural and anthropogenic (man-made) disturbances do not generally have similar impacts on coastal habitats and fishes, so one of our research goals is to determine how natural (e.g., hurricanes) and anthropogenic (e.g., coastal development) interact and what the resulting ecological impacts are.

The Fisheries Habitat Ecology Program focuses on coastal fishes, ranging from coral reef fishes to economically important sport fish. In all cases, the focal species are tools to learn about coastal ecological processes. Most recently, the focus has been on recreationally important species, including common snook, bonefish, tarpon and permit. All of these are economically important sport fish throughout the Caribbean.

The overall goal of the program is to use theoretical ecology to help frame applied research, and to then use the research findings to improve the way coastal fisheries resources are managed and conserved.

By necessity, this means that we make extra effort to conduct extensive outreach and education intended to educate user groups, local communities, resource managers and political leaders about coastal ecosystems.  

One way in which we do this is to involve recreational anglers in our research so that they learn about how science is conducted, become better educated about the resource and become better stewards of coastal resources.

As part of Dr. Aaron Adams' position at Mote as a Senior Scientist, he is also Director of Operations for Bonefish & Tarpon Trust. Bonefish & Tarpon Trust is a science-based conservation organization dedicated to conserving and enhancing global bonefish, tarpon and permit fisheries and their environments through stewardship, research, education and advocacy. The group funds, directs and oversees research with direct conservation applications.

Research Interests
  • Processes influencing ontogenetic habitat use by fishes
  • Impacts of anthropogenic habitat alterations on coastal and estuarine fishes
  • Juvenile fish habitat ecology
  • Impacts of natural disturbances on estuarine fishes
  • Ontogenetic habitat connectivity of coastal fishes
  • Involving recreational anglers in fisheries research
  • Establishing movement patterns and habitat use for recreationally important fishes, with applications to conservation

Research Projects
  • Understanding the implications of fidelity to spawning grounds by common snook
  • Use of PIT tags and remote antennae to estimate survival and movement of juvenile snook in nursery habitats (Andrew Barbour, Ph.D. thesis, University of Florida)
  • Caribbean Bonefish Research Program: tag-recapture, genetic analysis, conservation applications for bonefish (Bahamas, Mexico, Belize, Cuba)
  • Project Permit: tag-recapture of permit to determine movement patterns (in Florida, Mexico, Belize, Cuba)
  • Identification and restoration of habitats essential to juvenile tarpon

Outreach
We believe that a key component of applied research is to disseminate research findings through many avenues.

Peer review
It is essential that research findings are published in scientific journals to ensure that the research passes the test of peer review and is also shared with scientific colleagues so it can contribute to an overall better understanding of coastal ecology. 

General audiences
The Fisheries Habitat Ecology Program also strives to translate research findings for a non-scientific audience so that it can be shared with various user groups and coastal communities. A major outlet for recent research has been topical articles in fishing magazines. The Program also regularly contributes information to television fishing shows, newspapers, television news shows, online magazines, blogs and news sites.

Peer-Reviewed Publications
Most of these publications are available in pdf format. Please e-mail aadams@mote.org to request a PDF reprint. You may also click here for access to Mote's online research resource.

Barbour, A.J., A.J. Adams, and D.C. Behringer. In Press. Comparison and cost-benefit analysis of PIT tag antennae re-sighting and seine-net recapture techniques for survival analysis of an estuarine-dependent fish. Fisheries Research.

Barbour, A.B. and A.J. Adams. In Review. Biologging to examine multiple life stages of an
estuarine-dependent fish, common snook, Centropomus undecimalis. Submitted to Marine Ecology Progress Series.

Barbour, A.B., A.J. Adams, D.C. Behringer, T. Yess, and R.K. Wolfe. 2011. PIT tag antenna
arrays as fishery monitoring tools in tropical environments. Proceedings of the 63rd Gulf and Caribbean Research Institute. 118-124.

Adams, A.J., J.E. Hill, B.N. Kurth, and A.B. Barbour. In Press.  Effects of a thermal
disturbance on a subtropical, estuarine-dependent fish. Gulf and Caribbean Research.

Boucek, R.E. and A.J. Adams. 2011. Comparison of retention rates for three tag
types in common snook, Centropomus undecimalis. North American Journal of Fisheries Management. 31(4):693-699.

Adams, A.J., J.E. Hill and C. Samoray. 2011. Characteristics of spawning ground fidelity by a diadromous fish: a multi-year perspective. Environmental Biology of Fishes. 92:403-411.

Mateo, I., E. Durbin, R. Appeldoorn, A. Adams, F. Juanes, D. Durant. 2011. Inferred growth
of juvenile French grunts (Haemulon flavolineatum) and schoolmaster (Lutjanus apodus) in mangrove and seagrass habitats. Bulletin of Marine Science. 87(3):339-350.

Mateo I., E. Durbin, R. Appeldoorn, A. Adams, F. Juanes, R. Kingsley, P. Swart, and D.
Durant. 2010. Role of mangroves as nurseries for French grunt Haemulon flavolineatum and schoolmaster Lutjanus apodus assessed by otolith elemental fingerprints. Marine Ecology Progress Series. 402:197-212.

Adams, A.J., R.K. Wolfe, N. Barkowski, D. Overcash. 2009. Fidelity to spawning grounds
by a catadromous fish, Centropomus undecimalis. Marine Ecology Progress Series. 389:213-222.

Adams, A.J. and J.P. Ebersole. 2009. Mechanisms affecting recruitment patterns of fish and
decapods in tropical marine ecosystems. Chapter 6 In I. Nagelkerken (ed) Ecological linkages among tropical coastal ecosystems. Springer. New York.

Adams, A.J., R.K. Wolfe, C.A. Layman. 2009. Preliminary examination of how human-
driven freshwater flow alteration affects trophic ecology of juvenile snook (Centropomus undecimalis) in estuarine creeks. Estuaries and Coasts. 32(4):819-828.

Vásquez-Yeomans, L, E. Sosa-Cordero, M.R. Lara, A.J. Adams, and J.A. Cohuo. 2009.
Patterns of distribution and abundance of larval Albula spp. (Albulidae) in the western Caribbean and adjacent areas. Ichthyological Research.

Danylchuk, A.J., A.J. Adams, S.J. Cooke, and C.D. Suski. 2008. An evaluation of the
injury and short-term survival of bonefish (Albula spp) as influenced by a mechanical fish handling device used by recreational anglers. Fisheries Research. 93(1-2):248-252.

Adams, A.J. and R.K. Wolfe. 2007. Occurrence and persistence of non-native Cichlasoma
urophthalmus (Family Cichlidae) in estuarine habitats of southwest Florida (USA): environmental controls and movement patterns. Marine and Freshwater Research. 58(10): 921-930.

Miller, R.J., A.J. Adams, J.P. Ebersole, E. Ruiz.  2007.  Evidence for positive density-
dependent effects in recovering Diadema antillarum populations. Journal of     Experimental Marine Biology and Ecology. 349:215-222.

Adams, A.J., R.K. Wolfe, M.D. Tringali, E. Wallace, and G.T. Kellison. 2007. Rethinking
the status of Albula spp. biology in the Caribbean and Western Atlantic. In: J.S. Ault (ed) Biology And Management of the World Tarpon And Bonefish Fisheries. CRC Press. Boca Raton, FL.

Adams, A.J. and R.K. Wolfe. 2006. Cannibalism of juveniles by adult Centropomus     undecimalis.  Gulf of Mexico Science.  24(1/2):11-13.

Adams, A.J., C. Dahlgren, G.T. Kellison, M.S. Kendall, C.A. Layman, J.A. Ley, I.

Nagelkerken, J.E. Serafy.  2006. Nursery function of tropical backreef systems. Marine Ecology Progress Series. 318:287-301.


Adams, A.J., R.K. Wolfe, W.E. Pine III, B. Thornton. 2006. Efficacy of PIT tags and an
autonomous antenna system to study the juvenile life stage of an estuarine-dependent fish. Estuaries and Coasts. 29(2):311-317.

Dahlgren, C., G.T. Kellison, A.J. Adams, B.M. Gillanders, M.S. Kendall, C.A. Layman, J.A.
Ley, I. Nagelkerken, J.E. Serafy. 2006. Marine nurseries and effective juvenile habitats: concepts and applications.  Marine Ecology Progress Series. 312:291-295.

Layman, C.A., C. Dahlgren, G.T. Kellison, A.J. Adams, B.M. Gillanders, M.S. Kendall, J.A.
Ley, I. Nagelkerken, J.E. Serafy. 2006. Reply Comment: Marine nurseries and effective juvenile habitats.  Marine Ecology Progress Series. 318:307-308.

Adams, A.J., R.K. Wolfe, G.T. Kellison, B.C. Victor. 2006. Patterns of juvenile habitat use and seasonality of settlement by permit, Trachinotus falcatus. Environmental Biology of Fishes. 75:209-217.


Adams, A.J.  2005.  Fish assemblages associated with an established (> 10 years old) artificial reef and an adjacent natural reef.  Proc. 47th Annual Gulf and Caribbean Fisheries Institute. 441-457.


Adams, A.J. and D.A. Blewett. 2004. Spatial patterns of estuarine habitat use and temporal patterns in abundance of juvenile permit, Trachinotus falcatus in Charlotte Harbor, Florida. Gulf and Caribbean Research. 16(2):129-139.


Adams, A.J. and J.P. Ebersole. 2004. Resistance of coral reef fishes of back-reef and lagoon habitats to a hurricane.  Bulletin of Marine Science.75(1):101-113.


Adams, A.J. and J.P. Ebersole. 2004.  Processes influencing recruitment inferred from distributions of coral reef fishes. Bulletin of Marine Science. 75(2):153-174.


Adams, A.J., R.J. Miller, and J.P. Ebersole. 2004. Tethers make juvenile surgeonfishes (Acanthuridae) vulnerable to attacks by benthic invertebrates. Bulletin of Marine Science. 74(1):207-211.


Adams, A.J., J. V. Locascio, B.D. Robbins.  2004. Microhabitat use by a post-settlement stage estuarine fish: evidence from relative abundance and predation among habitats. Journal of Experiemental Marine Biology and Ecology. 299:17-33.


Miller, R.J., A.J. Adams, N.B. Ogden, J.C. Ogden, and J.P. Ebersole. 2003. Diadema antillarum 17 years after mass mortality. Coral Reefs. 22:181-187.


Adams, A.J. and J.P. Ebersole. 2002. Use of back-reef and lagoon habitats by coral reef fishes.  Marine Ecology Progress Series. 228:213-226.


Adams, A.J.  2001. Effects of a hurricane on two assemblages of coral reef fishes: multiple-year analysis reverses a false ‘snapshot’ interpretation.  Bulletin of Marine Science. 69(2): 341-356.


Adams. A.J. and  W.J. Tobias. 1999.  Red mangrove prop-root habitat as a finfish nursery area: a case study of Salt River Bay, St. Croix, USVI. Proc. 46th Annual Gulf and Caribbean Fisheries Institute. 22-46.

Adams, A.J. 1996. Estimates of finfish community structure in a mangrove lagoon: traps versus visual transects.  Proc. 27th Meeting of the Association of Marine Laboratories of the Caribbean. p.1-16.


About Us

Mote Marine Laboratory has been a leader in marine research since it was founded in 1955. Today, we incorporate public outreach as a key part of our mission. Mote is an independent nonprofit organization and has seven centers for marine research, the public Mote Aquarium and an Education Division specializing in public programs for all ages.

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